Primer to image analysis#
As a reference, you may want to review some general concepts commonly used in image analysis. We’ve provided these resources to give more context to the steps that occur within cell segmentation workflows. Review as needed before continuing the course.
Intro to classical image analysis from Christian Tischer
-[Bioimage Analysis - Christian Tischer (EMBL)]
Intro to image filtering and segmentation from Robert Haase
Segmentation
A general lecture on segmentation by Anne Carpenter from the iBiology Bioimage Analysis course
More about Filtering
Thresholding
Morphological operations