Function reference

Open/retrieve Census data

open_soma()

Open the Census

new_SOMATileDBContext_for_census()

Create SOMATileDBContext for Census

download_source_h5ad()

Download source H5AD to local file name.

get_source_h5ad_uri()

Locate source h5ad file for a dataset.

Export slices of data

get_seurat()

Export Census slices to Seurat

get_single_cell_experiment()

Export Census slices to SingleCellExperiment

Feature presence matrix

get_presence_matrix()

Read the feature dataset presence matrix.

Versioning of Census builds

get_census_version_description()

Get release description for a Census version

get_census_version_directory()

Get the directory of Census releases currently available

Census mirrors

get_census_mirror()

Get locator information about a Census mirror

get_census_mirror_directory()

Get the directory of Census mirrors currently available