CZ CELLxGENE Discover Cell Census • cellxgene.census

The cellxgene.census package provides an API to facilitate the use of the CZ CELLxGENE Discover Census. For more information about the API and the project visit the chanzuckerberg/cellxgene-census GitHub repo.

Status: Pre-release, under rapid development. Expect API changes.

Also see the Python API.

Installation

You can install the development version of cellxgene.census from GitHub with:

# install.packages("devtools")
devtools::install_github("chanzuckerberg/cellxgene-census/api/r/cellxgene.census")
print(cellxgene.census::open_soma())

(minimal apt dependencies: r-base cmake git)

Example

This is a basic example which shows you how to solve a common problem:

library(cellxgene.census)
## basic example code

For More Help

For more help, please file a issue on the repo, or contact us at soma@chanzuckerberg.com

If you believe you have found a security issue, we would appreciate notification. Please send email to security@chanzuckerberg.com.