The cellxgene.census
package provides an API to facilitate the use of the CZ CELLxGENE Discover Census. For more information about the API and the project visit the chanzuckerberg/cellxgene-census GitHub repo.
Status: Pre-release, under rapid development. Expect API changes.
Also see the Python API.
Installation
You can install the development version of cellxgene.census
from GitHub with:
# install.packages("devtools")
devtools::install_github("chanzuckerberg/cellxgene-census/api/r/cellxgene.census")
print(cellxgene.census::open_soma())
(minimal apt dependencies: r-base cmake git)
Example
This is a basic example which shows you how to solve a common problem:
library(cellxgene.census)
## basic example code
For More Help
For more help, please file a issue on the repo, or contact us at soma@chanzuckerberg.com
If you believe you have found a security issue, we would appreciate notification. Please send email to security@chanzuckerberg.com.