Index

_

__init__() (cellxgene_census.experimental.ml.huggingface.CellDatasetBuilder method) (cellxgene_census.experimental.ml.huggingface.GeneformerTokenizer method) (cellxgene_census.experimental.ml.pytorch.ExperimentDataPipe method) (cellxgene_census.experimental.ml.pytorch.Stats method)

C

CellDatasetBuilder (class in cellxgene_census.experimental.ml.huggingface)

cellxgene_census module

D

download_source_h5ad() (in module cellxgene_census)

E

experiment_dataloader() (in module cellxgene_census.experimental.ml.pytorch)

ExperimentDataPipe (class in cellxgene_census.experimental.ml.pytorch)

G

GeneformerTokenizer (class in cellxgene_census.experimental.ml.huggingface) get_all_available_embeddings() (in module cellxgene_census.experimental) get_all_census_versions_with_embedding() (in module cellxgene_census.experimental) get_anndata() (in module cellxgene_census) get_census_version_description() (in module cellxgene_census) get_census_version_directory() (in module cellxgene_census)

get_default_soma_context() (in module cellxgene_census) get_embedding() (in module cellxgene_census.experimental) get_embedding_metadata() (in module cellxgene_census.experimental) get_embedding_metadata_by_name() (in module cellxgene_census.experimental) get_highly_variable_genes() (in module cellxgene_census.experimental.pp) get_presence_matrix() (in module cellxgene_census) get_source_h5ad_uri() (in module cellxgene_census)

H

highly_variable_genes() (in module cellxgene_census.experimental.pp)

M

mean_variance() (in module cellxgene_census.experimental.pp)

module cellxgene_census

O

open_soma() (in module cellxgene_census)

S

Stats (class in cellxgene_census.experimental.ml.pytorch)