Metadata Extraction

Click through to any of these notebooks to run tools over digital libraries that extract information from papers one at a time.

These use cases are typically focussed on extracting experimental metadata from papers to accurately identify how general parameters are set in an experimental protocol.

Title Description
CellXGene Datasets Collaboration work to enable curation of data into the CellXGene system
CryoET Methods to extract metadata and study the structure of scientific protocols based on all available online data and knowledge.
NCATS Natural History Studies Using Alhazen to extract information from Natural History Studies.
RNAquarium Using LLMs to extract information from RNA studies in Zebrafish
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