The Science Workshop is an active development space for learning, sharing, and iteration.
Our hope is to share work-in-progress projects from members of the CZI science team, including early stage designs and prototypes, training materials, past webinars, and more. The featured projects on this page are not an exhaustive list of our work.
These projects are interactive! Feel free to share feedback with our team about any of these featured projects. Folks are encouraged to make pull requests, add comments, and reach out to our team with any questions.
General questions?
Email ghaliburton@chanzuckerberg.com.
Questions about projects or work areas?
You can find contact information on each specific project page.
The projects in the Science Workshop may not be currently maintained and may break or disappear without notice!
Papers
We describe the CZ Software Mentions dataset, a new dataset of software mentions in biomedical papers.
Tools
Public facing landscaping tools for the literature
WDL workflow for split-kmer phylogeny with pre-filtering by hierarchical clustering
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Open Source Code for Extraction of Methods and Datasets from Biomedical Papers
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Answer basic epidemiological questions using pathogen genomic data, without having to become an expert in phylogenetics.
Other