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cellxgene.census
1.15.0
Main Census Site
Reference
Articles
Use Census embeddings
Access CELLxGENE collaboration embeddings (scVI, Geneformer)
Explore and analyze the data
Learning about the CZ CELLxGENE Census
Summarizing cell and gene metadata
Integrating multi-dataset slices of data with Seurat
Normalizing full-length gene sequencing data
cellxgene.census capabilities
Querying and fetching the single-cell data and cell/gene metadata
Generating citations for Census slices
Census Datasets example
Genes measured in each cell (dataset presence matrix)
Computing on X using online (incremental) algorithms
Access CELLxGENE collaboration embeddings (scVI, Geneformer)
Articles
Embeddings
Access CELLxGENE collaboration embeddings (scVI, Geneformer)
Analysis
Learning about the CZ CELLxGENE Census
Summarizing cell and gene metadata
Integrating multi-dataset slices of data with Seurat
Normalizing full-length gene sequencing data
API
Querying and fetching the single-cell data and cell/gene metadata
Generating citations for Census slices
Census Datasets example
Genes measured in each cell (dataset presence matrix)
Computing on X using online (incremental) algorithms
Access CELLxGENE collaboration embeddings (scVI, Geneformer)